J4_6WQN_006

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGAAGCG*CACGUCUAAG*UGAUGGGGAGAAG*UCGAGUCGUU

Length

41 nucleotides

Bulged bases

6WQN|1|1|A|1489, 6WQN|1|1|G|1490, 6WQN|1|1|G|1569, 6WQN|1|1|G|1591

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WQN|1|1|G|1485
6WQN|1|1|C|1486
6WQN|1|1|G|1487
6WQN|1|1|A|1488
6WQN|1|1|A|1489
6WQN|1|1|G|1490
6WQN|1|1|C|1491
6WQN|1|1|G|1492
*
6WQN|1|1|C|1506
6WQN|1|1|A|1507
6WQN|1|1|C|1508
6WQN|1|1|G|1509
6WQN|1|1|U|1510
6WQN|1|1|C|1511
6WQN|1|1|U|1512
6WQN|1|1|A|1513
6WQN|1|1|A|1514
6WQN|1|1|G|1515
*
6WQN|1|1|U|1565
6WQN|1|1|G|1566
6WQN|1|1|A|1567
6WQN|1|1|U|1568
6WQN|1|1|G|1569
6WQN|1|1|G|1570
6WQN|1|1|G|1571
6WQN|1|1|G|1572
6WQN|1|1|A|1573
6WQN|1|1|G|1574
6WQN|1|1|A|1575
6WQN|1|1|A|1576
6WQN|1|1|G|1577
*
6WQN|1|1|U|1589
6WQN|1|1|C|1590
6WQN|1|1|G|1591
6WQN|1|1|A|1592
6WQN|1|1|G|1593
6WQN|1|1|U|1594
6WQN|1|1|C|1595
6WQN|1|1|G|1596
6WQN|1|1|U|1597
6WQN|1|1|U|1598

Current chains

Chain 1

23S rRNA

Nearby chains