J4_6WQN_008

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGC*GCG*CCUAAGGUAG*CGAAAG

Length

23 nucleotides

Bulged bases

6WQN|1|1|A|1998

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WQN|1|1|C|1860
6WQN|1|1|U|1861
6WQN|1|1|G|1862
6WQN|1|1|C|1863
*
6WQN|1|1|G|1931
6WQN|1|1|C|1932
6WQN|1|1|G|1933
*
6WQN|1|1|C|1951
6WQN|1|1|C|1952
6WQN|1|1|U|1953
6WQN|1|1|A|1954
6WQN|1|1|A|1955
6WQN|1|1|G|1956
6WQN|1|1|G|1957
6WQN|1|1|U|1958
6WQN|1|1|A|1959
6WQN|1|1|G|1960
*
6WQN|1|1|C|1994
6WQN|1|1|G|1995
6WQN|1|1|A|1996
6WQN|1|1|A|1997
6WQN|1|1|A|1998
6WQN|1|1|G|1999

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2