3D structure

PDB id
6WRS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GAGC*GAC*GGACG*CCC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_6WRS_009 not in the Motif Atlas
Homologous match to J4_4WF9_009
Geometric discrepancy: 0.2106
The information below is about J4_4WF9_009
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_77044.4
Basepair signature
cWW-F-tHS-F-cWW-cWW-cWW-F-cWW
Number of instances in this motif group
3

Unit IDs

6WRS|1|1|G|2670
6WRS|1|1|A|2671
6WRS|1|1|G|2672
6WRS|1|1|C|2673
*
6WRS|1|1|G|2701
6WRS|1|1|A|2702
6WRS|1|1|C|2703
*
6WRS|1|1|G|2758
6WRS|1|1|G|2759
6WRS|1|1|A|2760
6WRS|1|1|C|2761
6WRS|1|1|G|2762
*
6WRS|1|1|C|2796
6WRS|1|1|C|2797
6WRS|1|1|C|2798

Current chains

Chain 1
23S rRNA

Nearby chains

Chain L
50S ribosomal protein L3
Chain V
50S ribosomal protein L13
Chain W
50S ribosomal protein L14

Coloring options:


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