J4_6WRU_007

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUAGGCGAAGCG*CACGUCUAAG*UGAUGGGGAGAAG*UCGAGUCGUUGAUUU

Length

50 nucleotides

Bulged bases

6WRU|1|1|G|1569, 6WRU|1|1|U|1602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WRU|1|1|A|1481
6WRU|1|1|U|1482
6WRU|1|1|A|1483
6WRU|1|1|G|1484
6WRU|1|1|G|1485
6WRU|1|1|C|1486
6WRU|1|1|G|1487
6WRU|1|1|A|1488
6WRU|1|1|A|1489
6WRU|1|1|G|1490
6WRU|1|1|C|1491
6WRU|1|1|G|1492
*
6WRU|1|1|C|1506
6WRU|1|1|A|1507
6WRU|1|1|C|1508
6WRU|1|1|G|1509
6WRU|1|1|U|1510
6WRU|1|1|C|1511
6WRU|1|1|U|1512
6WRU|1|1|A|1513
6WRU|1|1|A|1514
6WRU|1|1|G|1515
*
6WRU|1|1|U|1565
6WRU|1|1|G|1566
6WRU|1|1|A|1567
6WRU|1|1|U|1568
6WRU|1|1|G|1569
6WRU|1|1|G|1570
6WRU|1|1|G|1571
6WRU|1|1|G|1572
6WRU|1|1|A|1573
6WRU|1|1|G|1574
6WRU|1|1|A|1575
6WRU|1|1|A|1576
6WRU|1|1|G|1577
*
6WRU|1|1|U|1589
6WRU|1|1|C|1590
6WRU|1|1|G|1591
6WRU|1|1|A|1592
6WRU|1|1|G|1593
6WRU|1|1|U|1594
6WRU|1|1|C|1595
6WRU|1|1|G|1596
6WRU|1|1|U|1597
6WRU|1|1|U|1598
6WRU|1|1|G|1599
6WRU|1|1|A|1600
6WRU|1|1|U|1601
6WRU|1|1|U|1602
6WRU|1|1|U|1603

Current chains

Chain 1

23S rRNA

Nearby chains