J4_6Y2L_003

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

6Y2L|1|L5|C|216, 6Y2L|1|L5|C|217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y2L|1|L5|C|196
6Y2L|1|L5|A|197
6Y2L|1|L5|A|198
6Y2L|1|L5|G|199
*
6Y2L|1|L5|C|215
6Y2L|1|L5|C|216
6Y2L|1|L5|C|217
6Y2L|1|L5|A|218
6Y2L|1|L5|G|219
6Y2L|1|L5|C|220
6Y2L|1|L5|C|221
6Y2L|1|L5|C|222
*
6Y2L|1|L5|G|226
6Y2L|1|L5|A|227
6Y2L|1|L5|C|228
*
6Y2L|1|L5|G|240
6Y2L|1|L5|G|241
6Y2L|1|L5|U|242
6Y2L|1|L5|A|243
6Y2L|1|L5|G|244

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26