J4_6YHS_010

3D structure

PDB id

6YHS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-amikacin complex - 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAUC*GAC*GGAAG*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YHS|1|1|G|2632
6YHS|1|1|A|2633
6YHS|1|1|U|2634
6YHS|1|1|C|2635
*
6YHS|1|1|G|2663
6YHS|1|1|A|2664
6YHS|1|1|C|2665
*
6YHS|1|1|G|2720
6YHS|1|1|G|2721
6YHS|1|1|A|2722
6YHS|1|1|A|2723
6YHS|1|1|G|2724
*
6YHS|1|1|U|2758
6YHS|1|1|A|2759
6YHS|1|1|C|2760

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain F

50S ribosomal protein L13

Chain G

50S ribosomal protein L14