J4_6YSI_010

3D structure

PDB id

6YSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAUC*GAC*GGAAG*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSI|1|1|G|2632
6YSI|1|1|A|2633
6YSI|1|1|U|2634
6YSI|1|1|C|2635
*
6YSI|1|1|G|2663
6YSI|1|1|A|2664
6YSI|1|1|C|2665
*
6YSI|1|1|G|2720
6YSI|1|1|G|2721
6YSI|1|1|A|2722
6YSI|1|1|A|2723
6YSI|1|1|G|2724
*
6YSI|1|1|U|2758
6YSI|1|1|A|2759
6YSI|1|1|C|2760

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain F

50S ribosomal protein L13

Chain G

50S ribosomal protein L14