J4_6YSR_012

3D structure

PDB id

6YSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

6YSR|1|a|C|183, 6YSR|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSR|1|a|G|142
6YSR|1|a|A|143
6YSR|1|a|G|144
6YSR|1|a|G|145
6YSR|1|a|G|146
*
6YSR|1|a|C|176
6YSR|1|a|G|177
6YSR|1|a|C|178
6YSR|1|a|A|179
6YSR|1|a|U|180
6YSR|1|a|A|181
6YSR|1|a|A|182
6YSR|1|a|C|183
6YSR|1|a|G|184
*
6YSR|1|a|C|193
6YSR|1|a|C|194
6YSR|1|a|A|195
6YSR|1|a|A|196
6YSR|1|a|A|197
6YSR|1|a|G|198
*
6YSR|1|a|U|219
6YSR|1|a|G|220
6YSR|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20