J4_6YST_012

3D structure

PDB id

6YST (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGGGG*CCGCAUAACG*CCAAAG*UGC

Length

25 nucleotides

Bulged bases

6YST|1|a|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YST|1|a|G|142
6YST|1|a|A|143
6YST|1|a|G|144
6YST|1|a|G|145
6YST|1|a|G|146
6YST|1|a|G|147
*
6YST|1|a|C|175
6YST|1|a|C|176
6YST|1|a|G|177
6YST|1|a|C|178
6YST|1|a|A|179
6YST|1|a|U|180
6YST|1|a|A|181
6YST|1|a|A|182
6YST|1|a|C|183
6YST|1|a|G|184
*
6YST|1|a|C|193
6YST|1|a|C|194
6YST|1|a|A|195
6YST|1|a|A|196
6YST|1|a|A|197
6YST|1|a|G|198
*
6YST|1|a|U|219
6YST|1|a|G|220
6YST|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20