J4_6YSU_012

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

6YSU|1|a|C|183, 6YSU|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|a|G|142
6YSU|1|a|A|143
6YSU|1|a|G|144
6YSU|1|a|G|145
6YSU|1|a|G|146
*
6YSU|1|a|C|176
6YSU|1|a|G|177
6YSU|1|a|C|178
6YSU|1|a|A|179
6YSU|1|a|U|180
6YSU|1|a|A|181
6YSU|1|a|A|182
6YSU|1|a|C|183
6YSU|1|a|G|184
*
6YSU|1|a|C|193
6YSU|1|a|C|194
6YSU|1|a|A|195
6YSU|1|a|A|196
6YSU|1|a|A|197
6YSU|1|a|G|198
*
6YSU|1|a|U|219
6YSU|1|a|G|220
6YSU|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20