J4_6Z1P_003
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGUUA*UGUAAGUCGAUUU*AAUAUA*UAUUAAAUCGUAC
- Length
- 37 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|1215, 6Z1P|1|Ab|A|1258, 6Z1P|1|Ab|U|1357, 6Z1P|1|Ab|U|1358
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Ab|G|1184
6Z1P|1|Ab|G|1185
6Z1P|1|Ab|U|1186
6Z1P|1|Ab|U|1187
6Z1P|1|Ab|A|1188
*
6Z1P|1|Ab|U|1212
6Z1P|1|Ab|G|1213
6Z1P|1|Ab|U|1214
6Z1P|1|Ab|A|1215
6Z1P|1|Ab|A|1216
6Z1P|1|Ab|G|1217
6Z1P|1|Ab|U|1218
6Z1P|1|Ab|C|1219
6Z1P|1|Ab|G|1220
6Z1P|1|Ab|A|1221
6Z1P|1|Ab|U|1222
6Z1P|1|Ab|U|1223
6Z1P|1|Ab|U|1224
*
6Z1P|1|Ab|A|1255
6Z1P|1|Ab|A|1256
6Z1P|1|Ab|U|1257
6Z1P|1|Ab|A|1258
6Z1P|1|Ab|U|1259
6Z1P|1|Ab|A|1260
*
6Z1P|1|Ab|U|1355
6Z1P|1|Ab|A|1356
6Z1P|1|Ab|U|1357
6Z1P|1|Ab|U|1358
6Z1P|1|Ab|A|1359
6Z1P|1|Ab|A|1360
6Z1P|1|Ab|A|1361
6Z1P|1|Ab|U|1362
6Z1P|1|Ab|C|1363
6Z1P|1|Ab|G|1364
6Z1P|1|Ab|U|1365
6Z1P|1|Ab|A|1366
6Z1P|1|Ab|C|1367
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AC
- 39-S ribosomal protein L47
- Chain AI
- Ribosomal protein L27
- Chain AP
- mL101
- Chain Aa
- LSU rRNA_1
- Chain Ax
- Ribosomal protein L23, putative
Coloring options: