J4_6Z1P_004
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCAAAAUAAC*GGG*CAACUGAAAAGAGA*UGC
- Length
- 30 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|1480, 6Z1P|1|Ab|G|1490
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Ab|G|1436
6Z1P|1|Ab|C|1437
6Z1P|1|Ab|A|1438
6Z1P|1|Ab|A|1439
6Z1P|1|Ab|A|1440
6Z1P|1|Ab|A|1441
6Z1P|1|Ab|U|1442
6Z1P|1|Ab|A|1443
6Z1P|1|Ab|A|1444
6Z1P|1|Ab|C|1445
*
6Z1P|1|Ab|G|1467
6Z1P|1|Ab|G|1468
6Z1P|1|Ab|G|1469
*
6Z1P|1|Ab|C|1478
6Z1P|1|Ab|A|1479
6Z1P|1|Ab|A|1480
6Z1P|1|Ab|C|1481
6Z1P|1|Ab|U|1482
6Z1P|1|Ab|G|1483
6Z1P|1|Ab|A|1484
6Z1P|1|Ab|A|1485
6Z1P|1|Ab|A|1486
6Z1P|1|Ab|A|1487
6Z1P|1|Ab|G|1488
6Z1P|1|Ab|A|1489
6Z1P|1|Ab|G|1490
6Z1P|1|Ab|A|1491
*
6Z1P|1|Ab|U|1707
6Z1P|1|Ab|G|1708
6Z1P|1|Ab|C|1709
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain Ad
- 50S ribosomal protein L3
- Chain Ap
- Ribosomal protein L14
- Chain At
- bL19m
- Chain Bb
- Small subunit ribosomal RNA; SSU rRNA
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