J4_6Z1P_008

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAU*AUU*AACAA*UAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|G|2337
6Z1P|1|Ab|A|2338
6Z1P|1|Ab|A|2339
6Z1P|1|Ab|U|2340
*
6Z1P|1|Ab|A|2368
6Z1P|1|Ab|U|2369
6Z1P|1|Ab|U|2370
*
6Z1P|1|Ab|A|2429
6Z1P|1|Ab|A|2430
6Z1P|1|Ab|C|2431
6Z1P|1|Ab|A|2432
6Z1P|1|Ab|A|2433
*
6Z1P|1|Ab|U|2466
6Z1P|1|Ab|A|2467
6Z1P|1|Ab|A|2468
6Z1P|1|Ab|C|2469

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AU

mL106

Chain Ad

50S ribosomal protein L3

Chain Ao

50S ribosomal protein L13

Chain Ap

Ribosomal protein L14