J4_6Z1P_010

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CC*GGUAACU*ACAAAU*AG

Length

17 nucleotides

Bulged bases

6Z1P|1|Ba|C|185, 6Z1P|1|Ba|A|202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ba|C|165
6Z1P|1|Ba|C|166
*
6Z1P|1|Ba|G|180
6Z1P|1|Ba|G|181
6Z1P|1|Ba|U|182
6Z1P|1|Ba|A|183
6Z1P|1|Ba|A|184
6Z1P|1|Ba|C|185
6Z1P|1|Ba|U|186
*
6Z1P|1|Ba|A|198
6Z1P|1|Ba|C|199
6Z1P|1|Ba|A|200
6Z1P|1|Ba|A|201
6Z1P|1|Ba|A|202
6Z1P|1|Ba|U|203
*
6Z1P|1|Bb|A|225
6Z1P|1|Bb|G|226

Current chains

Chain Ba

SSU rRNA_1

Chain Bb

SSU rRNA_2

Nearby chains

Chain BY

mS93

Chain Bv

mS26

Chain Bz

mS34