J4_6Z6L_005

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

6Z6L|1|L5|G|1271, 6Z6L|1|L5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|C|981
6Z6L|1|L5|U|982
6Z6L|1|L5|C|983
*
6Z6L|1|L5|G|1070
6Z6L|1|L5|C|1071
6Z6L|1|L5|C|1072
*
6Z6L|1|L5|G|1240
6Z6L|1|L5|C|1241
6Z6L|1|L5|G|1242
6Z6L|1|L5|C|1243
*
6Z6L|1|L5|G|1268
6Z6L|1|L5|G|1269
6Z6L|1|L5|A|1270
6Z6L|1|L5|G|1271
6Z6L|1|L5|C|1272
6Z6L|1|L5|G|1273

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein L7

Chain Lb

60S ribosomal protein L29