J4_6ZJ3_002
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- AAGAAGAG*CCCACG*CAG*CG(PSU)AU
- Length
- 22 nucleotides
- Bulged bases
- 6ZJ3|1|LC|G|381
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LC|A|376
6ZJ3|1|LC|A|377
6ZJ3|1|LC|G|378
6ZJ3|1|LC|A|379
6ZJ3|1|LC|A|380
6ZJ3|1|LC|G|381
6ZJ3|1|LC|A|382
6ZJ3|1|LC|G|383
*
6ZJ3|1|LC|C|396
6ZJ3|1|LC|C|397
6ZJ3|1|LC|C|398
6ZJ3|1|LC|A|399
6ZJ3|1|LC|C|400
6ZJ3|1|LC|G|401
*
6ZJ3|1|LC|C|405
6ZJ3|1|LC|A|406
6ZJ3|1|LC|G|407
*
6ZJ3|1|LC|C|419
6ZJ3|1|LC|G|420
6ZJ3|1|LC|PSU|421
6ZJ3|1|LC|A|422
6ZJ3|1|LC|U|423
Current chains
- Chain LC
- LSU rRNA chain 2
Nearby chains
- Chain LE
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- Ribosomal protein uL4
- Chain Ll
- Ribosomal protein uL24
Coloring options: