3D structure

PDB id
6ZM6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.59 Å

Loop

Sequence
UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
Length
28 nucleotides
Bulged bases
6ZM6|1|A|U|2372, 6ZM6|1|A|A|2374
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZM6|1|A|U|2336
6ZM6|1|A|A|2337
6ZM6|1|A|A|2338
6ZM6|1|A|G|2339
6ZM6|1|A|C|2340
6ZM6|1|A|C|2341
6ZM6|1|A|U|2342
6ZM6|1|A|G|2343
6ZM6|1|A|C|2344
6ZM6|1|A|G|2345
*
6ZM6|1|A|C|2368
6ZM6|1|A|A|2369
6ZM6|1|A|A|2370
6ZM6|1|A|U|2371
6ZM6|1|A|U|2372
6ZM6|1|A|A|2373
6ZM6|1|A|A|2374
6ZM6|1|A|C|2375
*
6ZM6|1|A|G|2421
6ZM6|1|A|U|2422
6ZM6|1|A|C|2423
6ZM6|1|A|A|2424
6ZM6|1|A|A|2425
6ZM6|1|A|C|2426
6ZM6|1|A|C|2427
*
6ZM6|1|A|G|2436
6ZM6|1|A|C|2437
6ZM6|1|A|A|2438

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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