J4_6ZM6_004
3D structure
- PDB id
- 6ZM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CUG*CC*GCAAAGGUAG*UGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 6ZM6|1|A|U|2634
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6ZM6_004 not in the Motif Atlas
- Homologous match to J4_5J7L_026
- Geometric discrepancy: 0.1486
- The information below is about J4_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_93343.1
- Basepair signature
- cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F
- Number of instances in this motif group
- 4
Unit IDs
6ZM6|1|A|C|2544
6ZM6|1|A|U|2545
6ZM6|1|A|G|2546
*
6ZM6|1|A|C|2569
6ZM6|1|A|C|2570
*
6ZM6|1|A|G|2587
6ZM6|1|A|C|2588
6ZM6|1|A|A|2589
6ZM6|1|A|A|2590
6ZM6|1|A|A|2591
6ZM6|1|A|G|2592
6ZM6|1|A|G|2593
6ZM6|1|A|U|2594
6ZM6|1|A|A|2595
6ZM6|1|A|G|2596
*
6ZM6|1|A|U|2630
6ZM6|1|A|G|2631
6ZM6|1|A|A|2632
6ZM6|1|A|A|2633
6ZM6|1|A|U|2634
6ZM6|1|A|G|2635
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain x
- Transfer RNA; tRNA
Coloring options: