3D structure

PDB id
6ZM6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.59 Å

Loop

Sequence
GUAG*CAC*GAGAUUU*ACC
Length
17 nucleotides
Bulged bases
6ZM6|1|B|U|1609, 6ZM6|1|B|U|1646
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZM6|1|B|G|1608
6ZM6|1|B|U|1609
6ZM6|1|B|A|1610
6ZM6|1|B|G|1611
*
6ZM6|1|B|C|1624
6ZM6|1|B|A|1625
6ZM6|1|B|C|1626
*
6ZM6|1|B|G|1642
6ZM6|1|B|A|1643
6ZM6|1|B|G|1644
6ZM6|1|B|A|1645
6ZM6|1|B|U|1646
6ZM6|1|B|U|1647
6ZM6|1|B|U|1648
*
6ZM6|1|B|A|1661
6ZM6|1|B|C|1662
6ZM6|1|B|C|1663

Current chains

Chain B
mitochondrial tRNAVal

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain 8
39S ribosomal protein L40, mitochondrial
Chain P
39S ribosomal protein L18, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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