J4_6ZMW_003
3D structure
- PDB id
- 6ZMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translational initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGGC*GUGC*GAGGUCG*CC
- Length
- 18 nucleotides
- Bulged bases
- 6ZMW|1|w|U|8, 6ZMW|1|w|G|9, 6ZMW|1|w|G|44, 6ZMW|1|w|G|45, 6ZMW|1|w|U|46, 6ZMW|1|w|C|47
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZMW|1|w|G|7
6ZMW|1|w|U|8
6ZMW|1|w|G|9
6ZMW|1|w|G|10
6ZMW|1|w|C|11
*
6ZMW|1|w|G|23
6ZMW|1|w|U|24
6ZMW|1|w|G|25
6ZMW|1|w|C|26
*
6ZMW|1|w|G|42
6ZMW|1|w|A|43
6ZMW|1|w|G|44
6ZMW|1|w|G|45
6ZMW|1|w|U|46
6ZMW|1|w|C|47
6ZMW|1|w|G|48
*
6ZMW|1|w|C|64
6ZMW|1|w|C|65
Current chains
- Chain w
- Initiator Met-tRNA-i
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain f
- 40S ribosomal protein S18
- Chain p
- Eukaryotic translation initiation factor 1
- Chain r
- Eukaryotic translation initiation factor 2 subunit 1
- Chain s
- Eukaryotic translation initiation factor 2 subunit 2
Coloring options: