3D structure

PDB id
6ZSB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with mRNA and P-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.5 Å

Loop

Sequence
CAAG*CGUUCCAG*CAC*GAAACAG
Length
22 nucleotides
Bulged bases
6ZSB|1|AA|A|700, 6ZSB|1|AA|U|711, 6ZSB|1|AA|C|815
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZSB|1|AA|C|698
6ZSB|1|AA|A|699
6ZSB|1|AA|A|700
6ZSB|1|AA|G|701
*
6ZSB|1|AA|C|708
6ZSB|1|AA|G|709
6ZSB|1|AA|U|710
6ZSB|1|AA|U|711
6ZSB|1|AA|C|712
6ZSB|1|AA|C|713
6ZSB|1|AA|A|714
6ZSB|1|AA|G|715
*
6ZSB|1|AA|C|800
6ZSB|1|AA|A|801
6ZSB|1|AA|C|802
*
6ZSB|1|AA|G|811
6ZSB|1|AA|A|812
6ZSB|1|AA|A|813
6ZSB|1|AA|A|814
6ZSB|1|AA|C|815
6ZSB|1|AA|A|816
6ZSB|1|AA|G|817

Current chains

Chain AA
12S rRNA

Nearby chains

Chain A0
28S ribosomal protein S34, mitochondrial
Chain AM
28S ribosomal protein S16, mitochondrial
Chain AU
28S ribosomal protein S26, mitochondrial
Chain XL
39S ribosomal protein L14, mitochondrial

Coloring options:

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