J4_6ZSD_004

3D structure

PDB id

6ZSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

6ZSD|1|XA|U|2316, 6ZSD|1|XA|A|2451, 6ZSD|1|XA|A|2452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZSD|1|XA|C|2314
6ZSD|1|XA|A|2315
6ZSD|1|XA|U|2316
6ZSD|1|XA|G|2317
*
6ZSD|1|XA|C|2326
6ZSD|1|XA|U|2327
*
6ZSD|1|XA|A|2450
6ZSD|1|XA|A|2451
6ZSD|1|XA|A|2452
6ZSD|1|XA|G|2453
*
6ZSD|1|XA|C|2671
6ZSD|1|XA|A|2672
6ZSD|1|XA|G|2673

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain XO

39S ribosomal protein L17, mitochondrial

Chain XT

39S ribosomal protein L22, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial