J4_6ZSD_005
3D structure
- PDB id
- 6ZSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
- Length
- 28 nucleotides
- Bulged bases
- 6ZSD|1|XA|U|2372, 6ZSD|1|XA|A|2374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZSD|1|XA|U|2336
6ZSD|1|XA|A|2337
6ZSD|1|XA|A|2338
6ZSD|1|XA|G|2339
6ZSD|1|XA|C|2340
6ZSD|1|XA|C|2341
6ZSD|1|XA|U|2342
6ZSD|1|XA|G|2343
6ZSD|1|XA|C|2344
6ZSD|1|XA|G|2345
*
6ZSD|1|XA|C|2368
6ZSD|1|XA|A|2369
6ZSD|1|XA|A|2370
6ZSD|1|XA|U|2371
6ZSD|1|XA|U|2372
6ZSD|1|XA|A|2373
6ZSD|1|XA|A|2374
6ZSD|1|XA|C|2375
*
6ZSD|1|XA|G|2421
6ZSD|1|XA|U|2422
6ZSD|1|XA|C|2423
6ZSD|1|XA|A|2424
6ZSD|1|XA|A|2425
6ZSD|1|XA|C|2426
6ZSD|1|XA|C|2427
*
6ZSD|1|XA|G|2436
6ZSD|1|XA|C|2437
6ZSD|1|XA|A|2438
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain XU
- 39S ribosomal protein L23, mitochondrial
- Chain XY
- 39S ribosomal protein L47, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: