3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGAAG*CGCG*CAG*CGUAC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_6ZTL_007 not in the Motif Atlas
Homologous match to J4_5J7L_019
Geometric discrepancy: 0.0959
The information below is about J4_5J7L_019
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_71729.5
Basepair signature
cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
Number of instances in this motif group
4

Unit IDs

6ZTL|1|BA|G|297
6ZTL|1|BA|G|298
6ZTL|1|BA|A|299
6ZTL|1|BA|A|300
6ZTL|1|BA|G|301
*
6ZTL|1|BA|C|316
6ZTL|1|BA|G|317
6ZTL|1|BA|C|318
6ZTL|1|BA|G|319
*
6ZTL|1|BA|C|323
6ZTL|1|BA|A|324
6ZTL|1|BA|G|325
*
6ZTL|1|BA|C|337
6ZTL|1|BA|G|338
6ZTL|1|BA|U|339
6ZTL|1|BA|A|340
6ZTL|1|BA|C|341

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BE
50S ribosomal protein L4
Chain BV
50S ribosomal protein L24

Coloring options:


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