3D structure

PDB id
6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CAAG*CGAAG*CGAG*CGUUAAG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_6ZTO_008 not in the Motif Atlas
Homologous match to J4_5J7L_020
Geometric discrepancy: 0.1571
The information below is about J4_5J7L_020
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_60168.1
Basepair signature
cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
Number of instances in this motif group
2

Unit IDs

6ZTO|1|BA|C|601
6ZTO|1|BA|A|602
6ZTO|1|BA|A|603
6ZTO|1|BA|G|604
*
6ZTO|1|BA|C|624
6ZTO|1|BA|G|625
6ZTO|1|BA|A|626
6ZTO|1|BA|A|627
6ZTO|1|BA|G|628
*
6ZTO|1|BA|C|635
6ZTO|1|BA|G|636
6ZTO|1|BA|A|637
6ZTO|1|BA|G|638
*
6ZTO|1|BA|C|650
6ZTO|1|BA|G|651
6ZTO|1|BA|U|652
6ZTO|1|BA|U|653
6ZTO|1|BA|A|654
6ZTO|1|BA|A|655
6ZTO|1|BA|G|656

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B5
50S ribosomal protein L35
Chain BE
50S ribosomal protein L4
Chain BM
50S ribosomal protein L15

Coloring options:


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