J4_7A0S_004

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGAUAAA*UC*GCGC*GG

Length

15 nucleotides

Bulged bases

7A0S|1|X|G|1284, 7A0S|1|X|A|1285, 7A0S|1|X|U|1286, 7A0S|1|X|G|1664

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_64571.5

Basepair signature

cWW-F-cWW-tSS-cWW-F-cWW

Number of instances in this motif group

4

Unit IDs

7A0S|1|X|C|1283
7A0S|1|X|G|1284
7A0S|1|X|A|1285
7A0S|1|X|U|1286
7A0S|1|X|A|1287
7A0S|1|X|A|1288
7A0S|1|X|A|1289
*
7A0S|1|X|U|1307
7A0S|1|X|C|1308
*
7A0S|1|X|G|1662
7A0S|1|X|C|1663
7A0S|1|X|G|1664
7A0S|1|X|C|1665
*
7A0S|1|X|G|1992
7A0S|1|X|G|1993

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain K

50S ribosomal protein L17

Chain P

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32