J4_7A0S_006

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UC*GGAAAG*CC*GCCCGUA

Length

17 nucleotides

Bulged bases

7A0S|1|X|A|1354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_10313.5

Basepair signature

cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7A0S|1|X|U|1326
7A0S|1|X|C|1327
*
7A0S|1|X|G|1351
7A0S|1|X|G|1352
7A0S|1|X|A|1353
7A0S|1|X|A|1354
7A0S|1|X|A|1355
7A0S|1|X|G|1356
*
7A0S|1|X|C|1417
7A0S|1|X|C|1418
*
7A0S|1|X|G|1613
7A0S|1|X|C|1614
7A0S|1|X|C|1615
7A0S|1|X|C|1616
7A0S|1|X|G|1617
7A0S|1|X|U|1618
7A0S|1|X|A|1619

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain Q

50S ribosomal protein L23