J4_7A0S_008

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GACUG*CACAG*UGAC*GUAAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_61477.5

Basepair signature

cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW

Number of instances in this motif group

4

Unit IDs

7A0S|1|X|G|1763
7A0S|1|X|A|1764
7A0S|1|X|C|1765
7A0S|1|X|U|1766
7A0S|1|X|G|1767
*
7A0S|1|X|C|1779
7A0S|1|X|A|1780
7A0S|1|X|C|1781
7A0S|1|X|A|1782
7A0S|1|X|G|1783
*
7A0S|1|X|U|1819
7A0S|1|X|G|1820
7A0S|1|X|A|1821
7A0S|1|X|C|1822
*
7A0S|1|X|G|1958
7A0S|1|X|U|1959
7A0S|1|X|A|1960
7A0S|1|X|A|1961
7A0S|1|X|C|1962

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2