J4_7A0S_010

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GAGU*AAC*GGAACG*CAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_54165.1

Basepair signature

cWW-F-F-F-cWW-cWW-cWW-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

7A0S|1|X|G|2622
7A0S|1|X|A|2623
7A0S|1|X|G|2624
7A0S|1|X|U|2625
*
7A0S|1|X|A|2653
7A0S|1|X|A|2654
7A0S|1|X|C|2655
*
7A0S|1|X|G|2711
7A0S|1|X|G|2712
7A0S|1|X|A|2713
7A0S|1|X|A|2714
7A0S|1|X|C|2715
7A0S|1|X|G|2716
*
7A0S|1|X|C|2748
7A0S|1|X|A|2749
7A0S|1|X|G|2750
7A0S|1|X|C|2751

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain H

50S ribosomal protein L14