3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
CAAG*CGUUCCAG*CAC*GAAACAG
Length
22 nucleotides
Bulged bases
7A5G|1|A6|A|704, 7A5G|1|A6|U|715, 7A5G|1|A6|C|819
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7A5G|1|A6|C|702
7A5G|1|A6|A|703
7A5G|1|A6|A|704
7A5G|1|A6|G|705
*
7A5G|1|A6|C|712
7A5G|1|A6|G|713
7A5G|1|A6|U|714
7A5G|1|A6|U|715
7A5G|1|A6|C|716
7A5G|1|A6|C|717
7A5G|1|A6|A|718
7A5G|1|A6|G|719
*
7A5G|1|A6|C|804
7A5G|1|A6|A|805
7A5G|1|A6|C|806
*
7A5G|1|A6|G|815
7A5G|1|A6|A|816
7A5G|1|A6|A|817
7A5G|1|A6|A|818
7A5G|1|A6|C|819
7A5G|1|A6|A|820
7A5G|1|A6|G|821

Current chains

Chain A6
12S rRNA

Nearby chains

Chain L3
39S ribosomal protein L14, mitochondrial
Chain M6
28S ribosomal protein S16, mitochondrial
Chain Q3
39S ribosomal protein L19, mitochondrial
Chain U6
28S ribosomal protein S26, mitochondrial
Chain Z
Elongation factor Tu, mitochondrial
Chain a6
28S ribosomal protein S34, mitochondrial

Coloring options:

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