J4_7AC7_013

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

7AC7|1|2|C|183, 7AC7|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AC7|1|2|G|142
7AC7|1|2|A|143
7AC7|1|2|G|144
7AC7|1|2|G|145
7AC7|1|2|G|146
*
7AC7|1|2|C|176
7AC7|1|2|G|177
7AC7|1|2|C|178
7AC7|1|2|A|179
7AC7|1|2|U|180
7AC7|1|2|A|181
7AC7|1|2|A|182
7AC7|1|2|C|183
7AC7|1|2|G|184
*
7AC7|1|2|C|193
7AC7|1|2|C|194
7AC7|1|2|A|195
7AC7|1|2|A|196
7AC7|1|2|A|197
7AC7|1|2|G|198
*
7AC7|1|2|U|219
7AC7|1|2|G|220
7AC7|1|2|C|221

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20