J4_7AFI_004

3D structure

PDB id

7AFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state C (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

ACGGG*UUGAACA*UA*UGGAU

Length

19 nucleotides

Bulged bases

7AFI|1|A|G|926, 7AFI|1|A|G|1392, 7AFI|1|A|G|1529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AFI|1|A|A|923
7AFI|1|A|C|924
7AFI|1|A|G|925
7AFI|1|A|G|926
7AFI|1|A|G|927
*
7AFI|1|A|U|1390
7AFI|1|A|U|1391
7AFI|1|A|G|1392
7AFI|1|A|A|1393
7AFI|1|A|A|1394
7AFI|1|A|C|1395
7AFI|1|A|A|1396
*
7AFI|1|A|U|1506
7AFI|1|A|A|1507
*
7AFI|1|A|U|1528
7AFI|1|A|G|1529
7AFI|1|A|G|1530
7AFI|1|A|A|1531
7AFI|1|A|U|1532

Current chains

Chain A

16SrRNA

Nearby chains

Chain E

30S ribosomal protein S5

Chain K

30S ribosomal protein S11