J4_7AFL_002

3D structure

PDB id

7AFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GGAG*CAUAACG*CCAAAG*UGCC

Length

21 nucleotides

Bulged bases

7AFL|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AFL|1|A|G|141
7AFL|1|A|G|142
7AFL|1|A|A|143
7AFL|1|A|G|144
*
7AFL|1|A|C|178
7AFL|1|A|A|179
7AFL|1|A|U|180
7AFL|1|A|A|181
7AFL|1|A|A|182
7AFL|1|A|C|183
7AFL|1|A|G|184
*
7AFL|1|A|C|193
7AFL|1|A|C|194
7AFL|1|A|A|195
7AFL|1|A|A|196
7AFL|1|A|A|197
7AFL|1|A|G|198
*
7AFL|1|A|U|219
7AFL|1|A|G|220
7AFL|1|A|C|221
7AFL|1|A|C|222

Current chains

Chain A

16SrRNA

Nearby chains

Chain T

30S ribosomal protein S20