J4_7ASM_005

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7ASM|1|A|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASM|1|A|G|1347
7ASM|1|A|U|1348
7ASM|1|A|U|1349
7ASM|1|A|U|1350
7ASM|1|A|C|1351
*
7ASM|1|A|G|1375
7ASM|1|A|G|1376
7ASM|1|A|U|1377
7ASM|1|A|U|1378
7ASM|1|A|A|1379
7ASM|1|A|G|1380
*
7ASM|1|A|C|1441
7ASM|1|A|C|1442
*
7ASM|1|A|G|1641
7ASM|1|A|C|1642
7ASM|1|A|C|1643
7ASM|1|A|C|1644
7ASM|1|A|G|1645
7ASM|1|A|U|1646
7ASM|1|A|A|1647
7ASM|1|A|C|1648

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain R

50S ribosomal protein L23