J4_7ASM_007

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CUGC*GCG*CCUAAGGUAG*CGAAAG

Length

23 nucleotides

Bulged bases

7ASM|1|A|A|1998

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASM|1|A|C|1860
7ASM|1|A|U|1861
7ASM|1|A|G|1862
7ASM|1|A|C|1863
*
7ASM|1|A|G|1931
7ASM|1|A|C|1932
7ASM|1|A|G|1933
*
7ASM|1|A|C|1951
7ASM|1|A|C|1952
7ASM|1|A|U|1953
7ASM|1|A|A|1954
7ASM|1|A|A|1955
7ASM|1|A|G|1956
7ASM|1|A|G|1957
7ASM|1|A|U|1958
7ASM|1|A|A|1959
7ASM|1|A|G|1960
*
7ASM|1|A|C|1994
7ASM|1|A|G|1995
7ASM|1|A|A|1996
7ASM|1|A|A|1997
7ASM|1|A|A|1998
7ASM|1|A|G|1999

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2