J4_7ASP_001

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GAGUAACAC*GCUGC*GCAUAG*CC

Length

22 nucleotides

Bulged bases

7ASP|1|X|C|120, 7ASP|1|X|C|247

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|G|114
7ASP|1|X|A|115
7ASP|1|X|G|116
7ASP|1|X|U|117
7ASP|1|X|A|118
7ASP|1|X|A|119
7ASP|1|X|C|120
7ASP|1|X|A|121
7ASP|1|X|C|122
*
7ASP|1|X|G|246
7ASP|1|X|C|247
7ASP|1|X|U|248
7ASP|1|X|G|249
7ASP|1|X|C|250
*
7ASP|1|X|G|292
7ASP|1|X|C|293
7ASP|1|X|A|294
7ASP|1|X|U|295
7ASP|1|X|A|296
7ASP|1|X|G|297
*
7ASP|1|X|C|319
7ASP|1|X|C|320

Current chains

Chain X

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S12

Chain g

30S ribosomal protein S16

Chain h

30S ribosomal protein S17