3D structure

PDB id
7ASP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 50 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
CAAGG*CCGUAG*CGAGU*GCGUUUAG
Length
24 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASP|1|Y|C|644
7ASP|1|Y|A|645
7ASP|1|Y|A|646
7ASP|1|Y|G|647
7ASP|1|Y|G|648
*
7ASP|1|Y|C|668
7ASP|1|Y|C|669
7ASP|1|Y|G|670
7ASP|1|Y|U|671
7ASP|1|Y|A|672
7ASP|1|Y|G|673
*
7ASP|1|Y|C|680
7ASP|1|Y|G|681
7ASP|1|Y|A|682
7ASP|1|Y|G|683
7ASP|1|Y|U|684
*
7ASP|1|Y|G|694
7ASP|1|Y|C|695
7ASP|1|Y|G|696
7ASP|1|Y|U|697
7ASP|1|Y|U|698
7ASP|1|Y|U|699
7ASP|1|Y|A|700
7ASP|1|Y|G|701

Current chains

Chain Y
23S rRNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain E
50S ribosomal protein L4
Chain J
50S ribosomal protein L15

Coloring options:

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