J4_7ASP_005

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7ASP|1|Y|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|Y|G|1347
7ASP|1|Y|U|1348
7ASP|1|Y|U|1349
7ASP|1|Y|U|1350
7ASP|1|Y|C|1351
*
7ASP|1|Y|G|1375
7ASP|1|Y|G|1376
7ASP|1|Y|U|1377
7ASP|1|Y|U|1378
7ASP|1|Y|A|1379
7ASP|1|Y|G|1380
*
7ASP|1|Y|C|1441
7ASP|1|Y|C|1442
*
7ASP|1|Y|G|1641
7ASP|1|Y|C|1642
7ASP|1|Y|C|1643
7ASP|1|Y|C|1644
7ASP|1|Y|G|1645
7ASP|1|Y|U|1646
7ASP|1|Y|A|1647
7ASP|1|Y|C|1648

Current chains

Chain Y

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L34

Chain R

50S ribosomal protein L23