J4_7AZY_007

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

CUG*CG*CUUAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

7AZY|1|E|U|2314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7AZY_007 not in the Motif Atlas

Homologous match to J4_8C3A_007

Geometric discrepancy: 0.0862

The information below is about J4_8C3A_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZY|1|E|C|2192
7AZY|1|E|U|2193
7AZY|1|E|G|2194
*
7AZY|1|E|C|2248
7AZY|1|E|G|2249
*
7AZY|1|E|C|2267
7AZY|1|E|U|2268
7AZY|1|E|U|2269
7AZY|1|E|A|2270
7AZY|1|E|A|2271
7AZY|1|E|G|2272
7AZY|1|E|G|2273
7AZY|1|E|U|2274
7AZY|1|E|A|2275
7AZY|1|E|G|2276
*
7AZY|1|E|U|2310
7AZY|1|E|G|2311
7AZY|1|E|A|2312
7AZY|1|E|A|2313
7AZY|1|E|U|2314
7AZY|1|E|G|2315

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain x

60S ribosomal protein L2-A