J4_7BL4_009

3D structure

PDB id

7BL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUG*CGG*UCCUAAGGUAG*CGAAUG

Length

23 nucleotides

Bulged bases

7BL4|1|A|C|1925, 7BL4|1|A|U|1926, 7BL4|1|A|U|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL4|1|A|C|1833
7BL4|1|A|U|1834
7BL4|1|A|G|1835
*
7BL4|1|A|C|1905
7BL4|1|A|G|1906
7BL4|1|A|G|1907
*
7BL4|1|A|U|1923
7BL4|1|A|C|1924
7BL4|1|A|C|1925
7BL4|1|A|U|1926
7BL4|1|A|A|1927
7BL4|1|A|A|1928
7BL4|1|A|G|1929
7BL4|1|A|G|1930
7BL4|1|A|U|1931
7BL4|1|A|A|1932
7BL4|1|A|G|1933
*
7BL4|1|A|C|1967
7BL4|1|A|G|1968
7BL4|1|A|A|1969
7BL4|1|A|A|1970
7BL4|1|A|U|1971
7BL4|1|A|G|1972

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2