J4_7BL5_009
3D structure
- PDB id
- 7BL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-50S-ObgE particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAGCGAAAUUCCUUG*CUGCACGAAUG
- Length
- 38 nucleotides
- Bulged bases
- 7BL5|1|A|C|1925, 7BL5|1|A|U|1943, 7BL5|1|A|U|1944, 7BL5|1|A|U|1963, 7BL5|1|A|C|1965, 7BL5|1|A|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7BL5|1|A|C|1833
7BL5|1|A|U|1834
7BL5|1|A|G|1835
*
7BL5|1|A|C|1905
7BL5|1|A|G|1906
*
7BL5|1|A|C|1924
7BL5|1|A|C|1925
7BL5|1|A|U|1926
7BL5|1|A|A|1927
7BL5|1|A|A|1928
7BL5|1|A|G|1929
7BL5|1|A|G|1930
7BL5|1|A|U|1931
7BL5|1|A|A|1932
7BL5|1|A|G|1933
7BL5|1|A|C|1934
7BL5|1|A|G|1935
7BL5|1|A|A|1936
7BL5|1|A|A|1937
7BL5|1|A|A|1938
7BL5|1|A|U|1939
7BL5|1|A|U|1940
7BL5|1|A|C|1941
7BL5|1|A|C|1942
7BL5|1|A|U|1943
7BL5|1|A|U|1944
7BL5|1|A|G|1945
*
7BL5|1|A|C|1962
7BL5|1|A|U|1963
7BL5|1|A|G|1964
7BL5|1|A|C|1965
7BL5|1|A|A|1966
7BL5|1|A|C|1967
7BL5|1|A|G|1968
7BL5|1|A|A|1969
7BL5|1|A|A|1970
7BL5|1|A|U|1971
7BL5|1|A|G|1972
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 7
- Ribosomal large subunit pseudouridine synthase D
- Chain 9
- GTPase ObgE/CgtA
- Chain C
- 50S ribosomal protein L2
Coloring options: