J4_7F5S_002

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

7F5S|1|L5|A|218, 7F5S|1|L5|G|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|C|196
7F5S|1|L5|A|197
7F5S|1|L5|A|198
7F5S|1|L5|G|199
*
7F5S|1|L5|C|215
7F5S|1|L5|C|216
7F5S|1|L5|C|217
7F5S|1|L5|A|218
7F5S|1|L5|G|219
7F5S|1|L5|C|220
7F5S|1|L5|C|221
7F5S|1|L5|C|222
*
7F5S|1|L5|G|226
7F5S|1|L5|A|227
7F5S|1|L5|C|228
*
7F5S|1|L5|G|240
7F5S|1|L5|G|241
7F5S|1|L5|U|242
7F5S|1|L5|A|243
7F5S|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26