J4_7F5S_003

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CUC*GCC*GCGCGCG*CGGCGGAGCG

Length

23 nucleotides

Bulged bases

7F5S|1|L5|G|1266, 7F5S|1|L5|G|1268, 7F5S|1|L5|G|1271, 7F5S|1|L5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|C|981
7F5S|1|L5|U|982
7F5S|1|L5|C|983
*
7F5S|1|L5|G|1070
7F5S|1|L5|C|1071
7F5S|1|L5|C|1072
*
7F5S|1|L5|G|1240
7F5S|1|L5|C|1241
7F5S|1|L5|G|1242
7F5S|1|L5|C|1243
7F5S|1|L5|G|1244
7F5S|1|L5|C|1245
7F5S|1|L5|G|1246
*
7F5S|1|L5|C|1264
7F5S|1|L5|G|1265
7F5S|1|L5|G|1266
7F5S|1|L5|C|1267
7F5S|1|L5|G|1268
7F5S|1|L5|G|1269
7F5S|1|L5|A|1270
7F5S|1|L5|G|1271
7F5S|1|L5|C|1272
7F5S|1|L5|G|1273

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein L7

Chain Lb

60S ribosomal protein L29