J4_7F5S_012

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GUA(A2M)UC*(OMG)U(OMU)C*GUG*CGCC

Length

17 nucleotides

Bulged bases

7F5S|1|L5|U|4677

QA status

Modified nucleotides: A2M, OMG, OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|G|4587
7F5S|1|L5|U|4588
7F5S|1|L5|A|4589
7F5S|1|L5|A2M|4590
7F5S|1|L5|U|4591
7F5S|1|L5|C|4592
*
7F5S|1|L5|OMG|4618
7F5S|1|L5|U|4619
7F5S|1|L5|OMU|4620
7F5S|1|L5|C|4621
*
7F5S|1|L5|G|4676
7F5S|1|L5|U|4677
7F5S|1|L5|G|4678
*
7F5S|1|L5|C|4712
7F5S|1|L5|G|4713
7F5S|1|L5|C|4714
7F5S|1|L5|C|4715

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LO

60S ribosomal protein L13a

Chain LV

60S ribosomal protein L23