J4_7KGB_001

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAAAC*GGGUUG*CCG*UAAG

Length

19 nucleotides

Bulged bases

7KGB|1|A|U|317, 7KGB|1|A|C|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KGB|1|A|C|270
7KGB|1|A|U|271
7KGB|1|A|A|272
7KGB|1|A|A|273
7KGB|1|A|A|274
7KGB|1|A|C|275
*
7KGB|1|A|G|313
7KGB|1|A|G|314
7KGB|1|A|G|315
7KGB|1|A|U|316
7KGB|1|A|U|317
7KGB|1|A|G|318
*
7KGB|1|A|C|493
7KGB|1|A|C|494
7KGB|1|A|G|495
*
7KGB|1|A|U|510
7KGB|1|A|A|511
7KGB|1|A|A|512
7KGB|1|A|G|513

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9