J4_7KGB_006

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGACUG*CACAG*UGAC*GUAACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KGB|1|A|C|2005
7KGB|1|A|G|2006
7KGB|1|A|A|2007
7KGB|1|A|C|2008
7KGB|1|A|U|2009
7KGB|1|A|G|2010
*
7KGB|1|A|C|2022
7KGB|1|A|A|2023
7KGB|1|A|C|2024
7KGB|1|A|A|2025
7KGB|1|A|G|2026
*
7KGB|1|A|U|2061
7KGB|1|A|G|2062
7KGB|1|A|A|2063
7KGB|1|A|C|2064
*
7KGB|1|A|G|2213
7KGB|1|A|U|2214
7KGB|1|A|A|2215
7KGB|1|A|A|2216
7KGB|1|A|C|2217
7KGB|1|A|G|2218

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2