J4_7KGB_011

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUU*GAUAGGAC*GUGGAAAG*CGG

Length

22 nucleotides

Bulged bases

7KGB|1|a|A|208

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KGB|1|a|C|138
7KGB|1|a|U|139
7KGB|1|a|U|140
*
7KGB|1|a|G|174
7KGB|1|a|A|175
7KGB|1|a|U|176
7KGB|1|a|A|177
7KGB|1|a|G|178
7KGB|1|a|G|179
7KGB|1|a|A|180
7KGB|1|a|C|181
*
7KGB|1|a|G|202
7KGB|1|a|U|203
7KGB|1|a|G|204
7KGB|1|a|G|205
7KGB|1|a|A|206
7KGB|1|a|A|207
7KGB|1|a|A|208
7KGB|1|a|G|209
*
7KGB|1|a|C|218
7KGB|1|a|G|219
7KGB|1|a|G|220

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20