J4_7LH5_022

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCG

Length

17 nucleotides

Bulged bases

7LH5|1|DA|A|603

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|DA|C|601
7LH5|1|DA|G|602
7LH5|1|DA|A|603
7LH5|1|DA|G|604
*
7LH5|1|DA|C|624
7LH5|1|DA|G|625
7LH5|1|DA|U|626
7LH5|1|DA|A|627
7LH5|1|DA|G|628
*
7LH5|1|DA|C|635
7LH5|1|DA|G|636
7LH5|1|DA|A|637
7LH5|1|DA|G|638
*
7LH5|1|DA|C|650
7LH5|1|DA|G|651
7LH5|1|DA|C|652
7LH5|1|DA|G|656

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D8

50S ribosomal protein L35

Chain DF

50S ribosomal protein L4

Chain DP

50S ribosomal protein L15