J4_7MDZ_007
3D structure
- PDB id
- 7MDZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S rabbit ribosome stalled with benzamide-CHX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*UGUGAA*UGGAAAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 7MDZ|1|5|A|2696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MDZ|1|5|G|2618
7MDZ|1|5|G|2619
*
7MDZ|1|5|U|2637
7MDZ|1|5|G|2638
7MDZ|1|5|U|2639
7MDZ|1|5|G|2640
7MDZ|1|5|A|2641
7MDZ|1|5|A|2642
*
7MDZ|1|5|U|2692
7MDZ|1|5|G|2693
7MDZ|1|5|G|2694
7MDZ|1|5|A|2695
7MDZ|1|5|A|2696
7MDZ|1|5|A|2697
7MDZ|1|5|G|2698
*
7MDZ|1|5|U|2718
7MDZ|1|5|C|2719
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain R
- Ribosomal protein L19
- Chain U
- eL22
- Chain g
- 60S ribosomal protein L34
- Chain k
- 60S ribosomal protein L38
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