J4_7MSH_013

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUGG*CGU*AAGGUCGUC*GCC

Length

19 nucleotides

Bulged bases

7MSH|1|y|U|8, 7MSH|1|y|U|48, 7MSH|1|y|C|49

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MSH|1|y|G|7
7MSH|1|y|U|8
7MSH|1|y|G|9
7MSH|1|y|G|10
*
7MSH|1|y|C|26
7MSH|1|y|G|27
7MSH|1|y|U|28
*
7MSH|1|y|A|44
7MSH|1|y|A|45
7MSH|1|y|G|46
7MSH|1|y|G|47
7MSH|1|y|U|48
7MSH|1|y|C|49
7MSH|1|y|G|50
7MSH|1|y|U|51
7MSH|1|y|C|52
*
7MSH|1|y|G|65
7MSH|1|y|C|66
7MSH|1|y|C|67

Current chains

Chain y

initiator tRNA (Met)

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain m

30S ribosomal protein S13